STratifying Resilience and Depression Longitudinally
About the dataset
STratifying Resilience and Depression Longitudinally (STRADL) is a population-based study built on the Generation Scotland: Scottish Family Health Study (GS:SFHS) resource. The aim of STRADL is to subtype major depressive disorder (MDD) on the basis of its aetiology, using detailed clinical, cognitive, and brain imaging assessments. The GS:SFHS provides an important opportunity to study complex gene-environment interactions, incorporating linkage to existing datasets and inclusion of early-life variables for two longitudinal birth cohorts. For more information, see https://doi.org/10.1186/s12888-022-04509-7.
The study is part of the COORDINATE-MDD consortium. For more information, see: https://doi.org/10.1038/s44220-023-00187-w.
The study is part of the COORDINATE-MDD consortium. For more information, see: https://doi.org/10.1038/s44220-023-00187-w.
| Study | STratifying Resilience and Depression Longitudinally | |
|---|---|---|
| Study Website | STRADL | |
| Data Descriptor Paper | https://pubmed.ncbi.nlm.nih.gov/35237729/ | |
| DUA | Please contact Dr. Christos Davatzikos to obtain the DUA for the derived data and request an introduction to the study PI to obtain the DUA for the raw data. | |
| Disease Tag | depression | |
| Age (mean ± SD) | 59.6 ± 10.1 | |
| Age Range | 26-84 | |
| % Female | 58.6 | |
| CUBIC Project | /cbica/projects/MultisiteMD |
|
| PI for CUBIC Access Approval | Christos Davatzikos | |
| N Subjects | 1080 | |
| N MR Sessions | 1080 | |
|
RAVENS
(DRAMMS-1.4.1)
(1080/1080 complete) |
/cbica/projects/MultisiteMD/Pipelines/CoordinateMD_3.5D_2020/Protocols/RAVENS/STRADL
|
|
|
fMRIPrep
(23.1.3)
(769/1080 complete) |
/cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/Protocols
/opt/conda/envs/fmriprep/bin/fmriprep \
/cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/Data/Aberdeen/ \
/cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/Protocols/Aberdeen/ \
participant \
--participant_label 0001 \
--fs-license-file /cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/license.txt \
--skip-bids-validation \
--fs-no-reconall \
--use-syn-sdc warn \
--output-spaces MNI152NLin2009cAsym:res-2 \
--debug all
|
|
|
XCP-D
(0.7.1rc6)
(1034/1080 complete) |
/cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/Protocols/XCP/
/usr/local/miniconda/bin/xcp_d \
/cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/Protocols/Aberdeen/ \
/cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/Protocols/XCP/Aberdeen/ \
participant \
--participant_label 0001 \
--input-type fmriprep \
-p 36P \
--work-dir /cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/Protocols/Aberdeen/ \
--motion-filter-type lp \
--band-stop-min 6 \
--motion-filter-order 4 \
--despike \
--fd-thresh 0 \
--lower-bpf 0.01 \
--upper-bpf 0.08 \
--bpf-order 2 \
--head-radius auto \
--dummy-scans auto \
--min-coverage 0.5 \
--smoothing 0 \
--fs-license-file /cbica/projects/MultisiteMD/CoordinateMD_Studies/STRADL/Pipelines/STRADL_fMRI_2024/license.txt
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| Non-Imaging Data |
Contact Mathilde Antoniades to request access to the non-imaging data. |
Funding
MC_PC_17209/MRC_/Medical Research Council/United Kingdom
MC_PC_MR/R01910X/1/MRC_/Medical Research Council/United Kingdom
MC_UU_00011/7/MRC_/Medical Research Council/United Kingdom
MR/S035818/1/MRC_/Medical Research Council/United Kingdom