Lab Meetings at PennLINC

Lab meetings occur every Monday from 2P-3P, with exceptions for holiday and travel schedule.

The current lab meeting schedule can be found here.

All members of the image analysis team (regardless of faculty mentor) are welcome to attend, but trainees supervised by Satterthwaite are expected to attend– and let me know directly if you cannot attend; also please make every effort to be promptly on time. Clinical research coordinators are encouraged to attend as well, excepting conflicts with participant visits. The meeting rotates among the following formats. Note that if you sign up for a slot on the schedule please mark it in your calendar clearly– we definitely want to avoid last second schedule conflicts / content vacancies.

Work in progress

These occur typically twice a month. In general, each lab member presents their current project in a typical scientific format, with a focus on explaining new methods, exciting results, and current obstacles. It should be emphasized that the goal is that these presentations are both accessible and interesting to lab members of all skill levels. This is an informal format where questions, discussion, and interruptions are highly encouraged. However, as scientific presentations is an important skill at all career stages, it is good to take this opportunity to prepare for this well in advance.

Informatics and pipeline updates

These occur 1-2 times a semester, and typically are focused on new initiatives regarding neuroinformatics initiatives.

Journal club

This occurs on an irregular schedule, and usually focuses on an important article that may guide new projects or a change in practice. In general, each lab member should expect to lead journal club 1x/ year. A slide deck describing the article, displaying major results, and key questions is suggested. All lab members are expected to read the article prior to journal club.

Quarterly update

This is a format to allow everyone in the lab to keep track of ongoing projects, and encourage collaboration. It occurs 1x a quarter. This is an opportunity for us all to stay on the same page regarding what projects are going on in the lab. Each lab member has about ~3 minutes to present a single slide describing what they have been most focused on in the past month. If you are managing several projects, choose one to focus on (but it is ok to allude briefly to the others). Given the fact that there always are a wide range of experience levels in the lab, it should be emphasized that the most important goal of this update is that it is accessible, and folks can grasp “the big picture”.

The quarterly update may be more likely to be accessible if the following elements are covered.

  1. Study hypothesis: What is the over-arching hypothesis of the research? If currently at an early study phase, would use grant aims that are most applicable to the current phase.

  2. Dataset: including study (PNC, reward, ABCD, HBN, etc), modality (t1, DTI, etc), and data type (cortical thickness, FA, etc).

  3. Study stage: Be explict about where you are in a project. Stages of a project are outlined in the Stages of a Project Wiki.

  4. Current progress: This should be the meat of the update. Place current work in the context of study phase and hypotheses. Emphasize progress, but also challenges / obstacles so we can rapidly problem solve as a group. Again, focus on making the challenges and results accessible to lab members of all backgrounds.

  5. Reproducibility: Who is your “buddy” for this project, and how will reproducibility be ensured? Be explicit regarding where you are in terms of project reproducibility checkpoints outlined in the Reproducibility Guide.