Current Projects in the Lab

Below is a list of the current projects in the lab:

Project TitleNameLink
Sex Differences in the Functional Topography of Association Networks in YouthSheila Shanmugan
Neurocognitive Maturation in Multi-scale Functional Brain NetworksAdam Pines
Personalized Functional Brain Network Topography Predicts Youth CognitionArielle Keller
N-back Adversity: Association between Neighborhood Socioeconomic Status and Executive System Activation in YouthKristin Murtha
Mobile Footprinting: Linking Individual Distinctiveness in Mobility Patterns to Mood, Sleep, and Brain Functional ConnectivityCedric Huchuan Xia
Developmental coupling of cerebral blood flow and fMRI fluctuations in youthErica Baller
Cortical-Subcortical White Matter Supports Transcranial Magnetic Stimulation Engagement of the AmygdalaValerie Jill Sydnor
A Developmental Reduction of the Excitation:Inhibition Ratio in Association Cortex during AdolescenceBart Larsen
Linking Individual Differences in Personalized Functional Network Topography to Psychopathology in YouthZaixu Cui
ALE Meta-Analysis of Structural Imaging Studies in Patients with Chronic Pain versus Healthy ControlsAlina Henn
Linking Brain Connectivity to Borderline Personality DisorderMax
Diverse Club DevelopmentMax
Whole-brain molecular axes encoding relative spatial location in the human brainJacob Vogel
Spontaneous Activity Develops Along the Hierarchical Sensorimotor-Association AxisValerie Jill Sydnor
Individual Differences in Delay Discounting are Associated with Dorsal Prefrontal Cortex Connectivity in YouthKahini Mehta
Mapping the relationship of white matter lesions to depression in multiple sclerosisErica Baller
ModelArray: an R package for statistical analysis of fixel-wise data (and beyond)Chenying ZhaoModelArray documentation website;
source code for ModelArray;
source code for ConFixel;
code used in the paper;
other supporting code for ModelArray/ConFixel
Establishing the Validity of Compressed Sensing Diffusion Spectrum Imaging (CS-DS)Hamsi Radhakrishnancode used in the paper
Functional Connectivity Development along the Sensorimotor-Association Axis Enhances the Cortical HierarchyAudrey Luo
BABS: BIDS App BootstrapChenying ZhaoBABS documentation website;
source code for BABS;
code used in the paper;
other supporting code for BABS

How to Add Your Project

If you’d like to add your project to this list, read on! Successful/complete documentation of your project requires two things:

  1. A Github Pages site, and
  2. An entry on this page

Github Pages Documentation

We use Github Pages to reproducibly document how we arrived at a scientific finding, usually for a paper or poster. A Github Pages site is a static website linked directly to a Github repository – for example, this website is a Github Pages site for the Github repository PennLINC/ The underlying code is markdown and is rendered (converted) automatically into a website by Github. You’ll want to create one of these sites for your project and its code repository. To learn how to do this, see this tutorial.

Project Page Entry

Lastly, you’ll need to add your project to the list below. To add a project to this list, please first read the documentation guide to familiarize yourself with the process of adding content to this website. When it comes time to add your project, simply add a Pull Request with your entry in the raw text of this table:

| Project Title |    Name    |               Link                |
| ------------- | ---------- | --------------------------------- |
| My Project    | Joe Bloggs | [My Project]( |
| Project 2     | Jane Doe   | [Project 2](   |

Simply add a new line, using the pipes | to delineate columns, and a newline to delineate rows — don’t forget to use correct markdown formatting for links: [title](url).

For additional information see the Project Setup Page.